PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0001s0258.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 381aa MW: 42106 Da PI: 8.898

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0001s0258.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.7e-12	151	197	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++N+++ L ++P + kK +Ka++L +A++Y+k+Lq Kaladp0001s0258.1.p 151 DHIVAERKRREKLNQRIIALSAVVPGL-----KKKDKASVLAEAIKYLKQLQ 197 5899*********************.....89***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEASACGGFF QGLMDDESLI NQWMTNSHED LSALLLPVAA ATFSDYDLQH SLLYDYQQPP 60 AKQLKTNSWD SCLIDPKPSP DTHNNSAAVA ASFLYPANPP QFTIGTSRLD CTVWNSENNH 120 ILKSGHDHQG AKRKFRITSD AATTRSSGAQ DHIVAERKRR EKLNQRIIAL SAVVPGLKKK 180 DKASVLAEAI KYLKQLQERV KILEEQTKGN KTTQSAVVLR KAKLIIADDD ANQKPFSGEM 240 FIEGTPTEEL LPEIEARVCE RNVLIRIHCD KKKGVLEKTL SEIVKLRLTL VSSSVITFGS 300 SALDITIAAQ VNFRSRSKAR STLINIAHAH LLHTHRQFSS ISLSIKLNNS TIGSAYILLY 360 IYTDLFNFLR ADGGGMLSDS *

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEASACGGFF QGLMDDESLI NQWMTNSHED LSALLLPVAA ATFSDYDLQH SLLYDYQQPP  60
AKQLKTNSWD SCLIDPKPSP DTHNNSAAVA ASFLYPANPP QFTIGTSRLD CTVWNSENNH  120
ILKSGHDHQG AKRKFRITSD AATTRSSGAQ DHIVAERKRR EKLNQRIIAL SAVVPGLKKK  180
DKASVLAEAI KYLKQLQERV KILEEQTKGN KTTQSAVVLR KAKLIIADDD ANQKPFSGEM  240
FIEGTPTEEL LPEIEARVCE RNVLIRIHCD KKKGVLEKTL SEIVKLRLTL VSSSVITFGS  300
SALDITIAAQ VNFRSRSKAR STLINIAHAH LLHTHRQFSS ISLSIKLNNS TIGSAYILLY  360
IYTDLFNFLR ADGGGMLSDS *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	161	ERKRRE
2	157	162	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-44	bHLH family protein