PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0001s0216.6.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 807aa    MW: 88487 Da    PI: 7.4391
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0001s0216.6.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.71.1e-23186287199
                          EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                          f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L  gD v+F  
  Kaladp0001s0216.6.p 186 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTSGWSLFVSQKNLGLGDAVLFL- 273
                          99****************************963.3445679************************************************. PP

                          -SSSEE..EEEEE-S CS
                   B3  85 dgrsefelvvkvfrk 99 
                           + +++el+++++r+
  Kaladp0001s0216.6.p 274 -RGESGELRLGIRRA 287
                          .449999*****996 PP
2Auxin_resp109.14.7e-36312393182
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                          +a+a+ tk+vF+v+Y+Pra+ +eFv++++k++k++ +++  G++fkm+fe++ds+err+sG+v+g+ dldp+rWpnSkWr+L
  Kaladp0001s0216.6.p 312 VANAILTKNVFQVFYSPRATLAEFVIPIQKYMKSIIHPIPTGTKFKMRFEMDDSPERRCSGIVTGMGDLDPYRWPNSKWRCL 393
                          68999****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    
MELGGNHAVR LEGRKRSYLS CDGDCGDKAG CARCWSSSSS SSSSSNSPAS LASSIYLELW  60
HACAGPLTSL PKKGNVVVYF PQGHLEQVAS NSPFSPMEMP TYDLQPQIFC RVLNVQRLVS  120
TISTSDIYSI SCKCYSSKAN KENDEVYTQL SLLPQPELAG LKLSGSDMLS ENGSDELALK  180
STPHMFCKTL TASDTSTHGG FSVPRRAAED CFPPLDYKQQ RPSQELVAKD LHGVEWRFRH  240
IYRGQPRRHL LTSGWSLFVS QKNLGLGDAV LFLRGESGEL RLGIRRAVRP RNCLPDSAIG  300
NQSSLPTVLS SVANAILTKN VFQVFYSPRA TLAEFVIPIQ KYMKSIIHPI PTGTKFKMRF  360
EMDDSPERRC SGIVTGMGDL DPYRWPNSKW RCLMVRWDED HASEHQERVS PWEVDASICL  420
PPPMSFHGSP QLKKLRTCLQ SSLQSGLADD LSTGGSGFLD LEESMRSSSK VLRGQENSGF  480
RSPYLLNQPL GSSKPSQATV LEGLNIQSTG YTTFGKSDVF PTVLQGQEVC PYSAWRKPSI  540
GCCNLSSTHQ RPEPSFYPVA SAGSRSVYFP LHSGIQKEMQ GPAVSLSSRF AGGSGPFGRP  600
PVYNGMDIDE PRRFVPMNAQ KVPVDAAASL PHSLEAAAKD GRNETSSAAP TACRLFGISL  660
TGETSTQNAS KRSCTKVHKQ GSMVGRAIDL SKLNGYTDLL FELEWLFAME GLLRDPEKGW  720
RILYTDSEND MMVVGDDPWH EFCEVVSKIH IYTKDEVEKL NIGVVASDDT QSCLEEAPEG  780
AGVSKSSSVG QPESYPTKKK GLERLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein