PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0001s0216.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 691aa    MW: 76271.4 Da    PI: 7.1646
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0001s0216.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3758.6e-2470171199
                          EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                          f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L  gD v+F  
  Kaladp0001s0216.2.p  70 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTSGWSLFVSQKNLGLGDAVLFL- 157
                          99****************************963.3445679************************************************. PP

                          -SSSEE..EEEEE-S CS
                   B3  85 dgrsefelvvkvfrk 99 
                           + +++el+++++r+
  Kaladp0001s0216.2.p 158 -RGESGELRLGIRRA 171
                          .449999*****996 PP
2Auxin_resp109.43.8e-36196277182
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                          +a+a+ tk+vF+v+Y+Pra+ +eFv++++k++k++ +++  G++fkm+fe++ds+err+sG+v+g+ dldp+rWpnSkWr+L
  Kaladp0001s0216.2.p 196 VANAILTKNVFQVFYSPRATLAEFVIPIQKYMKSIIHPIPTGTKFKMRFEMDDSPERRCSGIVTGMGDLDPYRWPNSKWRCL 277
                          68999****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
MEMPTYDLQP QIFCRVLNVQ RLANKENDEV YTQLSLLPQP ELAGLKLSGS DMLSENGSDE  60
LALKSTPHMF CKTLTASDTS THGGFSVPRR AAEDCFPPLD YKQQRPSQEL VAKDLHGVEW  120
RFRHIYRGQP RRHLLTSGWS LFVSQKNLGL GDAVLFLRGE SGELRLGIRR AVRPRNCLPD  180
SAIGNQSSLP TVLSSVANAI LTKNVFQVFY SPRATLAEFV IPIQKYMKSI IHPIPTGTKF  240
KMRFEMDDSP ERRCSGIVTG MGDLDPYRWP NSKWRCLMVR WDEDHASEHQ ERVSPWEVDA  300
SICLPPPMSF HGSPQLKKLR TCLQSSLQSG LADDLSTGGS GFLDLEESMR SSSKVLRGQE  360
NSGFRSPYLL NQPLGSSKPS QATVLEGLNI QSTGYTTFGK SDVFPTVLQG QEVCPYSAWR  420
KPSIGCCNLS STHQRPEPSF YPVASAGSRS VYFPLHSGIQ KEMQGPAVSL SSRFAGGSGP  480
FGRPPVYNGM DIDEPRRFVP MNAQKVPVDA AASLPHSLEA AAKDGRNETS SAAPTACRLF  540
GISLTGETST QNASKRSCTK VHKQGSMVGR AIDLSKLNGY TDLLFELEWL FAMEGLLRDP  600
EKGWRILYTD SENDMMVVGD DPWHEFCEVV SKIHIYTKDE VEKLNIGVVA SDDTQSCLEE  660
APEGAGVSKS SSVGQPESYP TKKKGLERLN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein