PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0001s0103.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 28367.5 Da PI: 8.7989 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 8.1e-17 | 57 | 106 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d s ++ r +lg+f+ aeeAa+a++ a++ l+g Kaladp0001s0103.1.p 57 RFLGVRQRP-SGRWVAEIKDTS---QKLRLWLGTFDKAEEAAAAYDSAARLLRG 106 678******.7*********42...35***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDSTKAACSD YQPHSRQPAT STCHIFSASK AHPFEEAKHS SNLCKRSGIN KGLIKTRFLG 60 VRQRPSGRWV AEIKDTSQKL RLWLGTFDKA EEAAAAYDSA ARLLRGRNAK TNFPVGHGVM 120 GTQENCSLLR KNPRLYNLLQ HAVLKNQARS RSVSTWRCPS TSSNQGRYNE TETGSTVVFD 180 TLVDETFNAC GSSLSDQNND RALNINDFVF PSSCSSSSKV YSSVVVAPSF STCFNEEDRP 240 LEEKGSYSTE CGTSQGAQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 3e-19 | ERF family protein |