PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021301241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 27556.8 Da PI: 9.2775 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.4 | 4.4e-20 | 9 | 54 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell ++v ++G+++W++I++ ++ gR++k+c++rw + XP_021301241.1 9 KGPWSPEEDELLRKLVLRHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 54 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 56.9 | 4.6e-18 | 63 | 105 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde + +a++++G++ W+tIar ++ gRt++ +k++w++ XP_021301241.1 63 AFTQEEDETIMRAHARYGNK-WATIARLLN-GRTDNAVKNHWNST 105 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MDQDFDRVKG PWSPEEDELL RKLVLRHGPR NWSLISKSIP GRSGKSCRLR WCNQLSPEVE 60 HRAFTQEEDE TIMRAHARYG NKWATIARLL NGRTDNAVKN HWNSTLKRKL SMEDGDSLQE 120 TGKRSAKSQR SESSNNMGSP SGSDVSDLGL NVAESKRSGV STELTLGRSS NESSELNNDN 180 SSSEKVLLAQ KHEMGTKTAT VDQNLMAAMQ EMIRKEVRDC MAEFGFQSEG VRNAGFKRIG 240 IRRID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 1e-73 | MYB family protein |