PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021301128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 27041.8 Da PI: 9.5124 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84 | 9.3e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr+g++KKA+EL +LCdaev ++ifsstgklye++s XP_021301128.1 10 RIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLMIFSSTGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 79.5 | 8.4e-27 | 82 | 170 | 10 | 98 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + + + +q+e+a L+++++nLq+++R+l+Ge+L+ Ls+++Lq+Le+qLe sl+ +R kK+++l+++i+el ++ + +++en +L kk+ XP_021301128.1 82 PSLEVKFWQREAAILRQQLQNLQENHRQLMGEQLHGLSVEDLQNLENQLEMSLRGVRMKKERILTDEIQELSQRGNVIHQENVELYKKV 170 4567899*******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRKGLIK KAKELAILCD AEVGLMIFSS TGKLYEFAST 60 SMKSVIERYN SLREEQQQLL NPSLEVKFWQ REAAILRQQL QNLQENHRQL MGEQLHGLSV 120 EDLQNLENQL EMSLRGVRMK KERILTDEIQ ELSQRGNVIH QENVELYKKV NLMRKENMEL 180 YKKVYGTRDV NTSDGNALTS YCFDSGEGSH VPVHLRLSQP EPQNYDTPNR SKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-111 | MIKC_MADS family protein |