PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021301013.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 424aa MW: 46244.3 Da PI: 9.801

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021301013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.4	1.8e-14	348	400	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ ee+ ++ + XP_021301013.1 348 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELQKKQEEMMEMQK 400 79*****************************************9999998865 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MGSHLNYKNF GEAPSMEGNG SKPLGNFPLA RQPSIYSLTF DELQNTFGGL GKDFGSMNMD 60 ELLKNISTAE ETQAVTTASV AGGEGSVSGG NLQRQGSLTL PRTLSQKTVD EVWKDLMKEN 120 DGAKDGSNGG GVGGGANLPQ SQQTXXXMTL EEFLVRAGVV REDMQQIGMA NNSGFFGNNT 180 AVAFGFQQTN RNNGFLSNNN SVLNQPPRLP LNMSGVKSSQ PQQQQQQQQQ QQQPQQQQQQ 240 QPQPLFPKQQ TVAFAPSMHL MNTAQLANPG ARGSMVGIGD PSMNSNLVQS TGLQSGGMGI 300 VGLASPPSQI SSDMIPNSSV DTTSLSPVPY VFGRGRKCGA ALEKVVERRQ RRMIKNRESA 360 ARSRARKQAY TLELEAEVAK LKEMNQELQK KQEEMMEMQK NQMLETMSRP CKRHCLRRTL 420 TGPW

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MGSHLNYKNF GEAPSMEGNG SKPLGNFPLA RQPSIYSLTF DELQNTFGGL GKDFGSMNMD  60
ELLKNISTAE ETQAVTTASV AGGEGSVSGG NLQRQGSLTL PRTLSQKTVD EVWKDLMKEN  120
DGAKDGSNGG GVGGGANLPQ SQQTXXXMTL EEFLVRAGVV REDMQQIGMA NNSGFFGNNT  180
AVAFGFQQTN RNNGFLSNNN SVLNQPPRLP LNMSGVKSSQ PQQQQQQQQQ QQQPQQQQQQ  240
QPQPLFPKQQ TVAFAPSMHL MNTAQLANPG ARGSMVGIGD PSMNSNLVQS TGLQSGGMGI  300
VGLASPPSQI SSDMIPNSSV DTTSLSPVPY VFGRGRKCGA ALEKVVERRQ RRMIKNRESA  360
ARSRARKQAY TLELEAEVAK LKEMNQELQK KQEEMMEMQK NQMLETMSRP CKRHCLRRTL  420
TGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34000.1	4e-87	bZIP family protein