PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021300945.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 355aa MW: 41246 Da PI: 6.5733

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021300945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.7	3.6e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kkv++k+++l +vik+vd+yk+ePwdL++ ++ + e++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++ XP_021300945.1 7 VPPGFRFHPTDEELVDYYLRKKVASKRIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 100 69**************************.9***********954555442556******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s + +l+g++ktLvfykgrap+g+k+dW+mheyrle XP_021300945.1 101 YS-RLSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDVIK DVDLYKIEPW DLQELCRIGT 60 EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSRLSLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GTPQEEGWVV CRVFKKRMTT VRKVGEYDSS CWYDDQVSFM 180 QDLDSPRRIP QPYASYHHHY PCKQELELQY NLPHDPFLQL PQLESPKVPQ SAASVSCNSV 240 VPYGYDRNNG STLQSSTLTQ EEHMQPGHQQ NLNSLYNNSE QAVDQVTDWR VLDKFVASQL 300 SHEEASKENN YPDAAASLHV AEQMNLIANE SKRPEIAHQE YASTSTSSCQ IDLWK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDVIK DVDLYKIEPW DLQELCRIGT  60
EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSRLSLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GTPQEEGWVV CRVFKKRMTT VRKVGEYDSS CWYDDQVSFM  180
QDLDSPRRIP QPYASYHHHY PCKQELELQY NLPHDPFLQL PQLESPKVPQ SAASVSCNSV  240
VPYGYDRNNG STLQSSTLTQ EEHMQPGHQQ NLNSLYNNSE QAVDQVTDWR VLDKFVASQL  300
SHEEASKENN YPDAAASLHV AEQMNLIANE SKRPEIAHQE YASTSTSSCQ IDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-164	NAC family protein