PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021300855.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | FAR1 | ||||||||
Protein Properties | Length: 181aa MW: 21336.6 Da PI: 10.7399 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 99.3 | 4.1e-31 | 12 | 100 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA++vGF +r+++ ++s r+g++++r++vC+keg+r+ + ++ +++r++ra tr gCka+++vkkek+gkw+vt++++eHnH+l+p XP_021300855.1 12 FYDAYATRVGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRR-SENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHQLVP 100 9*******************************************99.9****************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MEFESEEAAK VFYDAYATRV GFIMRVDAFR RSMRDGKVVW RRLVCNKEGF RKLRPRRSEN 60 RKPRAITREG CKAMIVVKKE KTGKWVVTRF VKEHNHQLVP IPTSGRRSML LSQTPDEKDV 120 KIRELTAELQ RERKRSAAFQ EQLDMVLQEM EEHSNQLSRN IDDIVQSVRE IESKRVALSQ 180 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 1e-89 | FAR1 family protein |