PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021300714.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 405aa MW: 45571.1 Da PI: 9.0469

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021300714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.4	2.5e-31	79	132	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m++ gL+++hvkSHLQ+YR+ XP_021300714.1 79 PRLRWTPDLHLSFVHAVERLGGQERATPKLVLQMMNIRGLSIAHVKSHLQMYRS 132 8****************************************************7 PP
2	Myb_DNA-binding	48.6	1.8e-15	80	131	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ XP_021300714.1 80 RLRWTPDLHLSFVHAVERLGGQeraTPKLVLQMMNiRGLSIAHVKSHLQMYR 131 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MANYTVKRIE ISDEKKKESD IQAETSSSAG FQKLPSFDLN EEAIGYENDG DEINANNQTT 60 SQGKERTCRV RQYVRSKMPR LRWTPDLHLS FVHAVERLGG QERATPKLVL QMMNIRGLSI 120 AHVKSHLQMY RSKKLDKLGQ VVSQTSKVKR GREDFLGTYR RFSPGGHFRI DNASPLPSPP 180 VLLKQPYQPW GSAAPCNNTL GIENEPTVVF FQNGNNELTS SHVFDLREAI ARSSRFLEDK 240 RWPPRKMFAN QGKLSRSCSD ISCRWNSNSK ANNSSNDEFQ ICSSPTFFNC CQQPLSLLVA 300 GVKGARRLLP YHMNEETSQM EESSTGNRGR LREDKYRSLN LDLSLHNSLD NGCGGLKDND 360 GRIQEIDTVL ALSLSPSALT QQALSSSEQH KEIDHLIRAT FGTST

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MANYTVKRIE ISDEKKKESD IQAETSSSAG FQKLPSFDLN EEAIGYENDG DEINANNQTT  60
SQGKERTCRV RQYVRSKMPR LRWTPDLHLS FVHAVERLGG QERATPKLVL QMMNIRGLSI  120
AHVKSHLQMY RSKKLDKLGQ VVSQTSKVKR GREDFLGTYR RFSPGGHFRI DNASPLPSPP  180
VLLKQPYQPW GSAAPCNNTL GIENEPTVVF FQNGNNELTS SHVFDLREAI ARSSRFLEDK  240
RWPPRKMFAN QGKLSRSCSD ISCRWNSNSK ANNSSNDEFQ ICSSPTFFNC CQQPLSLLVA  300
GVKGARRLLP YHMNEETSQM EESSTGNRGR LREDKYRSLN LDLSLHNSLD NGCGGLKDND  360
GRIQEIDTVL ALSLSPSALT QQALSSSEQH KEIDHLIRAT FGTST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-38	G2-like family protein