PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021300688.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 28145.1 Da PI: 9.0496 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.8e-17 | 35 | 82 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEdell+ +++ +G g+W++ ++ g+ R++k+c++rw +yl XP_021300688.1 35 KGAWTREEDELLIAYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 82 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 59.8 | 6.1e-19 | 88 | 132 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T eEdel+++++ +lG++ W+ Ia++++ gRt++++k++w+++ XP_021300688.1 88 RGNFTDEEDELIIKLHSLLGNK-WSIIAARLP-GRTDNEIKNHWNTH 132 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MYEGHCQNQR QSLVLQSRKR KMGRSPCCEK GHMNKGAWTR EEDELLIAYI QAHGEGCWRS 60 LPKAAGLLRC GKSCRLRWIN YLRPDLKRGN FTDEEDELII KLHSLLGNKW SIIAARLPGR 120 TDNEIKNHWN THIKRKLLSR GIDPLTHRPI NEQAATHSTD RGSSAAVLRQ DAKTDIEFPY 180 LNHNNPDGEK YPELNLELRI SPPSSHPPRK EETTDRKIIC FCSSLGLQNS KGCTCGAVGI 240 EHLRFCA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 17 | 22 | SRKRKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 1e-94 | MYB family protein |