PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300665.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 325aa    MW: 37702.6 Da    PI: 6.278
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.89.9e-45211462128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     ppG+rF+P+deelvv+yLk+k+ +k+l+  + ikev++yk++P+ L ++ k+ +e ewyfF++rdkky++g+r++ra+ +gyWkatg d+ ++  
  XP_021300665.1  21 PPGYRFKPRDEELVVHYLKNKLFNKPLPP-NRIKEVQLYKYNPEILVEHSKSyGEGEWYFFTPRDKKYRNGSRPRRAAGDGYWKATGADRLLKF- 113
                     9*************************999.77**************8544442667**********************************9999. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g +vg +k Lvfy g+ pkg+ktdW+mhe+rl
  XP_021300665.1 114 QGVEVGYRKALVFYIGKPPKGQKTDWMMHEFRL 146
                     999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MSLPCKSQLP EDVEKFFKSF PPGYRFKPRD EELVVHYLKN KLFNKPLPPN RIKEVQLYKY  60
NPEILVEHSK SYGEGEWYFF TPRDKKYRNG SRPRRAAGDG YWKATGADRL LKFQGVEVGY  120
RKALVFYIGK PPKGQKTDWM MHEFRLKDPP KISNLNKDDM RLDDWVLCKI YKKMDKSMRS  180
SSSRQAAGTQ NQESDSEVQP ESENKAVELE REVPEYILGE TADGFPQGFM AFSELGHDHE  240
LEEHGGPFKG LATSLGSFYD DSMLEQNSAM FPNSISDYYD ENLMQQMTVL DPLPSSIPPF  300
RSFRSMDKLP SVSYNFDFSS QFFDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-60NAC family protein