PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300639.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GATA
Protein Properties Length: 283aa    MW: 31634.9 Da    PI: 5.2756
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.21.5e-15119155135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_021300639.1 119 CHHCGISEklTPAMRRGPAGPRTLCNACGLMWANKGT 155
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MRYSTNGNGV QAVLLLLGGR GASTNVPSSE FLLQEKVKVV GGSSEDSKLS RRIASLVRFR  60
EKRNERCFEK KIRYTCRKEV AQRMHRKNGQ FASLKECYNS ADGSWDQSDS TPESALRRCH  120
HCGISEKLTP AMRRGPAGPR TLCNACGLMW ANKGTLRDLR KGGRNAHFDS NEPETLTDTK  180
RSTMEPENSF ANDDEQGSPE DTKPVHLDSV NHLIRSNEQE FAENSHPFPI QVVNSSVNLD  240
DEDMQETLEE LADASGSDFE IPSHFDEQVD IDDTNIGTEW PGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.13e-49GATA family protein