PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021300571.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 164aa MW: 18729.3 Da PI: 7.324 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.2 | 3.2e-23 | 77 | 164 | 1 | 82 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 f k+ltpsd++++g +++pk++a++ +++++ +++l++ d++g +W++++i+r++++r++lt+GW+ Fv +++L +gD+++F XP_021300571.1 77 FSKKLTPSDTNTHGGFSVPKRHANDGclppldMSQHTPQQELVVIDLHGSEWRFRHIFRGQPKRHLLTSGWSTFVTSKKLVAGDTFIF 164 88*********************777*****9666666679*********************************************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 164 aa Download sequence |
MEQVEAYVNK DGTMEMPIYN LPSKILCRVL HVQLKAETGT DEVFAQITLL PEAEQDELSM 60 EHRNYQALPR VAHSRFFSKK LTPSDTNTHG GFSVPKRHAN DGCLPPLDMS QHTPQQELVV 120 IDLHGSEWRF RHIFRGQPKR HLLTSGWSTF VTSKKLVAGD TFIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G62000.3 | 3e-68 | ARF family protein |