PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300288.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family TCP
Protein Properties Length: 264aa    MW: 27141.8 Da    PI: 9.2842
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP102.66.9e-3229115389
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.k 89 
                     +kk +++++hT    +  R+R+++ caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ ++++s + +
  XP_021300288.1  29 VKKPPSKDRHTQSRWSWPRIRMPIICAARVFQLTRELGHXSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-TVSVSVRGGANSTSlS 115
                     79*****************************************************************9777.3333333333333321 PP

Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MSNSEGGATN GXIMDPQRQQ APGNGXLVVK KPPSKDRHTQ SRWSWPRIRM PIICAARVFQ  60
LTRELGHXSD GQTIEWLLRQ AEPSIIAATG TGTTPASFST VSVSVRGGAN STSLSSTTSS  120
SSLDHKPLLG PTPFILGKRV RADDDNAGKD DSGGVXAGPG VGSIVGPAGT PTGGFWAVPX  180
QADFGQVWSF APPPPPEMVV QTAAAAAAAA AATTAAAALF VQQQQAMGEA SAXRVGNYLP  240
GHLNLLASLS GAPGGSGRRD EDPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.12e-59TCP family protein