PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300233.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB
Protein Properties Length: 348aa    MW: 39432.4 Da    PI: 7.4613
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.8e-171360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l+++++ +G  +W+++++  g+ R++k+c++rw +yl
   XP_021300233.1 13 RGLWSPEEDEKLIRYITTHGHASWSSVPKLAGLQRCGKSCRLRWINYL 60
                     788*******************************************97 PP

2Myb_DNA-binding53.74.8e-1766109146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T++E+ +++d+++ lG++ W+ Ia++++ gRt++++k++w++
   XP_021300233.1  66 RGSFTPQEERIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109
                      89********************.*********.***********96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MVHHCCNKQK VKRGLWSPEE DEKLIRYITT HGHASWSSVP KLAGLQRCGK SCRLRWINYL  60
RPDLKRGSFT PQEERIIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL  120
DPNTHNLLAN PIYSINGSSN YGKSSCKLSC CIYDEQPTFS STVISVVGND DSYPVDMKPP  180
SLITSLPAAS SVAVPAPPDD GYYSQSCSTL LHEGISTIPT CKFEDQKRDI VQTIREQNPH  240
ASKESPTRSS WESLLIPFSS THPSYHQPGL GRSDCTWEWD GIEPRENKAV VLHRKQQAVA  300
NPPEQRVCEV EIEKRKDYYF SGAQDTEMEA SFESYCNFEF DTLVPYGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.17e-83MYB family protein