PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021300233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 348aa MW: 39432.4 Da PI: 7.4613 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.8e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G +W+++++ g+ R++k+c++rw +yl XP_021300233.1 13 RGLWSPEEDEKLIRYITTHGHASWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.7 | 4.8e-17 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E+ +++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_021300233.1 66 RGSFTPQEERIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MVHHCCNKQK VKRGLWSPEE DEKLIRYITT HGHASWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFT PQEERIIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL 120 DPNTHNLLAN PIYSINGSSN YGKSSCKLSC CIYDEQPTFS STVISVVGND DSYPVDMKPP 180 SLITSLPAAS SVAVPAPPDD GYYSQSCSTL LHEGISTIPT CKFEDQKRDI VQTIREQNPH 240 ASKESPTRSS WESLLIPFSS THPSYHQPGL GRSDCTWEWD GIEPRENKAV VLHRKQQAVA 300 NPPEQRVCEV EIEKRKDYYF SGAQDTEMEA SFESYCNFEF DTLVPYGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 7e-83 | MYB family protein |