PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021300119.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 197aa MW: 22672.4 Da PI: 8.6566 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.6 | 5.3e-26 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 kri+n rqvtf+kRr+g+lKKA+ELSvLCdae+ v+ifs +gklye + XP_021300119.1 9 KRIDNPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVVIFSAHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 61.4 | 3.6e-21 | 85 | 172 | 13 | 100 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + + ++e++ Lk+eie Lq+ +R + G + e ++l eL Le++Le + +iRs+K+++++++i+ l++ke l+ +nk+L+ k+ee XP_021300119.1 85 EPMEAKKEIDMLKQEIEILQKGLRYMFGGGSEIMTLDELFVLEKHLEIWIYHIRSTKMDIMFQEIQMLRNKEGILNAANKYLQDKIEE 172 5567899******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MARGRVQMKR IDNPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGVVIFSA HGKLYELATK 60 GTMQGLIERY TNYNGRTQPV EAVAEPMEAK KEIDMLKQEI EILQKGLRYM FGGGSEIMTL 120 DELFVLEKHL EIWIYHIRST KMDIMFQEIQ MLRNKEGILN AANKYLQDKI EENISNTDFT 180 TINTNMPHPL TIANNIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 3e-78 | MIKC_MADS family protein |