PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021300073.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 619aa MW: 68757.5 Da PI: 4.5319

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021300073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.3	1.5e-53	19	145	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLk+k+ ++kl+l ++i+e+d+yk++P++Lp + +k+++++w+fFs+rd+ky++g r+nrat++gyWkatgkd+++++ XP_021300073.1 19 PPGFRFHPTDEELVLYYLKRKICRRKLKL-DIIRETDVYKWDPEELPaQsILKSGDRQWFFFSPRDRKYPNGARSNRATRQGYWKATGKDRTITC 112 8**************************.99**********96346778999********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfykgrap+ge+tdWvmhey+l XP_021300073.1 113 -NSRVVGVKKTLVFYKGRAPNGERTDWVMHEYTL 145 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MTVTAAAADS CLGDDQVWPP GFRFHPTDEE LVLYYLKRKI CRRKLKLDII RETDVYKWDP 60 EELPAQSILK SGDRQWFFFS PRDRKYPNGA RSNRATRQGY WKATGKDRTI TCNSRVVGVK 120 KTLVFYKGRA PNGERTDWVM HEYTLDEEEL KRCQNMKDYY ALYKVYKKSG PGPKNGEQYG 180 APFKEEEWAE EEYVSNPVTV TPVKLPNEAI PDDNVKANGQ VQSALNDIEE FMRQLADEPA 240 LPLPQAQSGY ALPQVVSEEE TQSTLLDPSP RGVIFPEPIG VCHEQAGFEF SQSPTSHLHE 300 APEVTSVADH FGQVPQICEE GFLEIDDLSG PQTLTPNVGQ PAENVQFNEL DGLSEFDLFQ 360 DAAMFLQDMG PIDQGAVPFS YTDNMINQPQ LNAFGVNQHF QPQLNATGDN QRLQPQLNAF 420 GDNMLNQVGN QSQSCSNINL IDQQLLPHSN VAQVDYQLQF QSVGDELDQL IQLDQINGPL 480 WTHDQSSDVF TPSGSNLGNA APTSGLIYNG NNQDQGDENG GGPSRFSSAL WSFVESIPTT 540 PASAAENPLV NRALERMSSF SRLRLNARNT AVSAVNGAAT ARRTGGNRGF FFISILGALC 600 AILWFLIGTV RILGRSISS

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MTVTAAAADS CLGDDQVWPP GFRFHPTDEE LVLYYLKRKI CRRKLKLDII RETDVYKWDP  60
EELPAQSILK SGDRQWFFFS PRDRKYPNGA RSNRATRQGY WKATGKDRTI TCNSRVVGVK  120
KTLVFYKGRA PNGERTDWVM HEYTLDEEEL KRCQNMKDYY ALYKVYKKSG PGPKNGEQYG  180
APFKEEEWAE EEYVSNPVTV TPVKLPNEAI PDDNVKANGQ VQSALNDIEE FMRQLADEPA  240
LPLPQAQSGY ALPQVVSEEE TQSTLLDPSP RGVIFPEPIG VCHEQAGFEF SQSPTSHLHE  300
APEVTSVADH FGQVPQICEE GFLEIDDLSG PQTLTPNVGQ PAENVQFNEL DGLSEFDLFQ  360
DAAMFLQDMG PIDQGAVPFS YTDNMINQPQ LNAFGVNQHF QPQLNATGDN QRLQPQLNAF  420
GDNMLNQVGN QSQSCSNINL IDQQLLPHSN VAQVDYQLQF QSVGDELDQL IQLDQINGPL  480
WTHDQSSDVF TPSGSNLGNA APTSGLIYNG NNQDQGDENG GGPSRFSSAL WSFVESIPTT  540
PASAAENPLV NRALERMSSF SRLRLNARNT AVSAVNGAAT ARRTGGNRGF FFISILGALC  600
AILWFLIGTV RILGRSISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-126	NAC family protein