PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021300036.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 359aa MW: 41072.1 Da PI: 8.362

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021300036.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.7	2.3e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+evd++k+ePw+L++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_021300036.1 8 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREVDLNKMEPWELQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 101 69**************************.99**********963433332556********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_021300036.1 102 RN-TYRKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137 9.8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MGSSNGGVPP GFRFHPTDEE LLHYYLKKKV SFQKFDMEVI REVDLNKMEP WELQERCRIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNTYRKIGM RKTLVFYRGR 120 APHGQKTDWI MHEYRLEDGD DPQGNTSEDG WVVCRVFKKK NLFKVGSNGG GSSINSSDQQ 180 LNTSSSSQPR SLMHRSSDQY LVRHQHHNFE LNKAELALHY SHMQTPQYSL FQPQTLVQPH 240 KPINYEFAAA PAALPPNPPV MIKQLMSRDC ESGSESLRYQ ACEPGLEVGT CEPSQPMGVP 300 GRDEGMNEWS MLDRLVSASH MGHEDSSKGV RFEETNATAV HPMNQLSLRG EMDFWGYGK

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MGSSNGGVPP GFRFHPTDEE LLHYYLKKKV SFQKFDMEVI REVDLNKMEP WELQERCRIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNTYRKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDGD DPQGNTSEDG WVVCRVFKKK NLFKVGSNGG GSSINSSDQQ  180
LNTSSSSQPR SLMHRSSDQY LVRHQHHNFE LNKAELALHY SHMQTPQYSL FQPQTLVQPH  240
KPINYEFAAA PAALPPNPPV MIKQLMSRDC ESGSESLRYQ ACEPGLEVGT CEPSQPMGVP  300
GRDEGMNEWS MLDRLVSASH MGHEDSSKGV RFEETNATAV HPMNQLSLRG EMDFWGYGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-151	NAC family protein