PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021300014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | Whirly | ||||||||
Protein Properties | Length: 236aa MW: 26142.9 Da PI: 10.2806 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 179.4 | 7.3e-56 | 61 | 196 | 2 | 137 |
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkv 96 vyk+kaa++v + +ptf+++dsgnlkl+r+G+++l++ +a++erkydWek+q+fals+tev++l+++++++ +effhdp++ +sn+G+v k l + XP_021300014.1 61 VYKGKAAFSVTPLLPTFSKIDSGNLKLDRRGAMMLTFWPAVGERKYDWEKRQRFALSPTEVGSLISMGAHDVSEFFHDPSMLSSNAGQVSKKLYI 155 9********************************************************************************************** PP Whirly 97 ePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 + l G G++++l+v+n+l+k+ne+f vP++ aefavl+++ XP_021300014.1 156 KALDGGNGYMISLTVSNNLLKSNERFNVPITTAEFAVLKTA 196 ***9999********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MMKLWRSRNL SSQTLLSVKG GDVRDALWSH AFESRAAIST SIHDSAAKGN STARVIAPYT 60 VYKGKAAFSV TPLLPTFSKI DSGNLKLDRR GAMMLTFWPA VGERKYDWEK RQRFALSPTE 120 VGSLISMGAH DVSEFFHDPS MLSSNAGQVS KKLYIKALDG GNGYMISLTV SNNLLKSNER 180 FNVPITTAEF AVLKTACSFA LPHIIGWDWL TNRSHKGIEG SSSKVNPKLL DLEWDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 2e-84 | Whirly family protein |