PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021299874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 296aa MW: 31521.8 Da PI: 7.3897 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.8 | 6.6e-10 | 11 | 54 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ e d+ + +a + + + +W++Ia+ ++ g+tl+++k ++ XP_021299874.1 11 EWSREQDKAFENALATYAEDssdRWEKIAADVP-GKTLEEIKKHY 54 7******************9*************.**********9 PP | |||||||
2 | Myb_DNA-binding | 42 | 2.2e-13 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky XP_021299874.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166 6*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MTVDEAGSSS EWSREQDKAF ENALATYAED SSDRWEKIAA DVPGKTLEEI KKHYELLEDD 60 VSRIESGCVP LPSYNSLEGS AGYPGDEGTG KKGSGHLGHY NNESTNGSKN SRSDQERRKG 120 IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS 180 SIHDITSVGN GDISAPQGPI TGQSNGTATG GSTGKSAKQP PQHPAAPPAV GIYGAPTIGQ 240 PIGGPLVSAV GTPVNLSAPG HMAYGVRAPV PGTVVPGAPM NMGPVTYPMS HTSAHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-117 | MYB family protein |