PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021299835.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 282aa MW: 32051 Da PI: 5.4619 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.1 | 6.3e-18 | 80 | 133 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_021299835.1 80 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 133 456899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 131.5 | 3.1e-42 | 79 | 171 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k++n++L++++++L++e+++ XP_021299835.1 79 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAIKADNDALQAQNQKLHAEIMA 171 69**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MSCNGMAFFQ ANFMLQTPHE EDHQPPTAIN QLLPSCTPQD FHGVASFLGK RSMSFSGIDV 60 CEEANGEDDL SDDGSQAGEK KRRLNMEQVK TLEKNFELGN KLEPERKMQL ARALGLQPRQ 120 IAIWFQNRRA RWKTKQLEKD YDLLKRQYEA IKADNDALQA QNQKLHAEIM ALKSREPTES 180 INLNKETEGS CSNRSENSSD IKLDISRTPA IDSPLSTHPT SRTLFPTSVR PTGTVAQLFQ 240 NASSRPDLQP QKMDQIQMVK EESLSNMFCT IEDQSGFWPW LE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 136 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-121 | HD-ZIP family protein |