PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021299705.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 453aa MW: 49731.7 Da PI: 6.2735

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021299705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5e-10	174	212	5	43
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 k rr+++NReAAr+sR+RKka++++Le+ L++ + XP_021299705.1 174 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLTQLEQ 212 788*************************97666655554 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MQSFKAAAPT NPDMFCHSSF FLRGEDCNSR HQTRFSDLGE LDHPAPAFQH DDAVDLSPSS 60 IFSLKSSNVG VVANSLNYGS LNTSIGATEI VSSGTGCLDT GQFMYQKGTT FGASLGNGHI 120 ENWADSGLAD NSQQTDTSTD VDTDDKNQLN GVQRGAIITV DSVDQSKPKT GDQKTLRRLA 180 QNREAARKSR LRKKAYVQQL ENSRLRLTQL EQELQRARQQ GIFISSGLSG DHGHSVAGNG 240 ALAFDMDYAH WLEDHQRLIN DLRSAVNSHM GDNELRILVE GVMAHYDEVF RLKSIGAKAD 300 VFHMLSGMWK TPAERCFMWL GGFRSSELLK ILGNHLEPLT DQQLMGICNL QQSSQQAEDA 360 LSQGMEALQQ SLVDTLSSAC LGPTGSGNVA DYMGQMAIAM GKLATLENFL HQADLLRQQT 420 LQQMQRILTT RQAARALLVI SDYTSRLRAL SSL

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MQSFKAAAPT NPDMFCHSSF FLRGEDCNSR HQTRFSDLGE LDHPAPAFQH DDAVDLSPSS  60
IFSLKSSNVG VVANSLNYGS LNTSIGATEI VSSGTGCLDT GQFMYQKGTT FGASLGNGHI  120
ENWADSGLAD NSQQTDTSTD VDTDDKNQLN GVQRGAIITV DSVDQSKPKT GDQKTLRRLA  180
QNREAARKSR LRKKAYVQQL ENSRLRLTQL EQELQRARQQ GIFISSGLSG DHGHSVAGNG  240
ALAFDMDYAH WLEDHQRLIN DLRSAVNSHM GDNELRILVE GVMAHYDEVF RLKSIGAKAD  300
VFHMLSGMWK TPAERCFMWL GGFRSSELLK ILGNHLEPLT DQQLMGICNL QQSSQQAEDA  360
LSQGMEALQQ SLVDTLSSAC LGPTGSGNVA DYMGQMAIAM GKLATLENFL HQADLLRQQT  420
LQQMQRILTT RQAARALLVI SDYTSRLRAL SSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-164	bZIP family protein