PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021299703.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 457aa MW: 50129.1 Da PI: 5.8717

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021299703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	19.8	1.8e-06	174	200	5	31
CHHHCHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeL 31 k rr+++NReAAr+sR+RKk e +L XP_021299703.1 174 KTLRRLAQNREAARKSRLRKKLENSRL 200 788******************887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MQSFKAAAPT NPDMFCHSSF FLRGEDCNSR HQTRFSDLGE LDHPAPAFQH DDAVDLSPSS 60 IFSLKSSNVG VVANSLNYGS LNTSIGATEI VSSGTGCLDT GQFMYQKGTT FGASLGNGHI 120 ENWADSGLAD NSQQTDTSTD VDTDDKNQLN GVQRGAIITV DSVDQSKPKT GDQKTLRRLA 180 QNREAARKSR LRKKLENSRL RLTQLEQELQ RARQQGIFIS SGLSGDHGHS VAGNGALAFD 240 MDYAHWLEDH QRLINDLRSA VNSHMGDNEL RILVEGVMAH YDEVFRLKSI GAKADVFHML 300 SGMWKTPAER CFMWLGGFRS SELLKILGNH LEPLTDQQLM GICNLQQSSQ QAEDALSQGM 360 EALQQSLVDT LSSACLGPTG SGNVADYMGQ MAIAMGKLAT LENFLHQADL LRQQTLQQMQ 420 RILTTRQAAR ALLVISDYTS RLRALSSLWC LEGDGEP

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MQSFKAAAPT NPDMFCHSSF FLRGEDCNSR HQTRFSDLGE LDHPAPAFQH DDAVDLSPSS  60
IFSLKSSNVG VVANSLNYGS LNTSIGATEI VSSGTGCLDT GQFMYQKGTT FGASLGNGHI  120
ENWADSGLAD NSQQTDTSTD VDTDDKNQLN GVQRGAIITV DSVDQSKPKT GDQKTLRRLA  180
QNREAARKSR LRKKLENSRL RLTQLEQELQ RARQQGIFIS SGLSGDHGHS VAGNGALAFD  240
MDYAHWLEDH QRLINDLRSA VNSHMGDNEL RILVEGVMAH YDEVFRLKSI GAKADVFHML  300
SGMWKTPAER CFMWLGGFRS SELLKILGNH LEPLTDQQLM GICNLQQSSQ QAEDALSQGM  360
EALQQSLVDT LSSACLGPTG SGNVADYMGQ MAIAMGKLAT LENFLHQADL LRQQTLQQMQ  420
RILTTRQAAR ALLVISDYTS RLRALSSLWC LEGDGEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-158	bZIP family protein