PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299659.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 317aa    MW: 35178.4 Da    PI: 8.3261
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.61.3e-3250105357
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 
                      v YkeClkNhAaslGgha+DGCgEfmps++++ +++a+lkCaACgCHRnF Rr++
  XP_021299659.1  50 VVSYKECLKNHAASLGGHALDGCGEFMPSPTATpTDPASLKCAACGCHRNFXRRDP 105
                     689******************************9********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MELINTKPSR THKLSPHQRH NPQRQEQVFI APQELHQQHH LYTQHHQEMV VSYKECLKNH  60
AASLGGHALD GCGEFMPSPT ATPTDPASLK CAACGCHRNF XRRDPYDGPA FIQPXLPPRT  120
NPSSSPSPTH SRGPSPSPTH TPSSPVPYSY YSSAPHMLLA LSTGYSGPLD EYHHHLNHPN  180
PTMGRIENHS NNNPSGRKRS RTKFSKEQKE KMHAFAERLG WRMPKSEERL IEEFCNEVGV  240
DRGVLKVWMH NNKNTFSKKE ILAVGNLNID SNNNSGSNEG NGNGNAGVSF DSNSDIHNND  300
CSIQLHVSTI NGSSSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.13e-53ZF-HD family protein