PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021299644.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 344aa MW: 38080.9 Da PI: 7.8749

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021299644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.9	4.8e-33	20	74	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFveav+qLGG++kAtPk+++++m++ gLtl+h+kSHLQkYRl XP_021299644.1 20 KPRLKWTPELHQRFVEAVNQLGGADKATPKSLMRVMGISGLTLYHLKSHLQKYRL 74 79****************************************************8 PP
2	Myb_DNA-binding	62.2	1.1e-19	22	73	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++v+av+qlGg t+k+ +r mg g+tl+++ks++qky+ XP_021299644.1 22 RLKWTPELHQRFVEAVNQLGGAdkaTPKSLMRVMGiSGLTLYHLKSHLQKYR 73 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MGLQNLQNQN MSLVLSTDAK PRLKWTPELH QRFVEAVNQL GGADKATPKS LMRVMGISGL 60 TLYHLKSHLQ KYRLGKSQQT EICLSNKQDD YREIQSSNGD FHSDISDETH KQMNESLQIA 120 QALQMQMEVQ RKLHEQIEVQ RHLQLRIEAQ GKYLQSVLKK AQETLAGYSS SSVGVELAKA 180 QLSQLVSLVN TGCTSSSFSE LTEGGGSSLK IERKPMRGTI CSMESSLTSS ESSGRKDEEP 240 PKNDNISTPK SNASVELSLM DSHPEKKPLI GGSSNQAKGK KRSGSNISDR TCVEQPLAKR 300 LELPEEETGH WLRKSGLLGS FDLNSQCQSD IELGPKAIDL NCRE

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MGLQNLQNQN MSLVLSTDAK PRLKWTPELH QRFVEAVNQL GGADKATPKS LMRVMGISGL  60
TLYHLKSHLQ KYRLGKSQQT EICLSNKQDD YREIQSSNGD FHSDISDETH KQMNESLQIA  120
QALQMQMEVQ RKLHEQIEVQ RHLQLRIEAQ GKYLQSVLKK AQETLAGYSS SSVGVELAKA  180
QLSQLVSLVN TGCTSSSFSE LTEGGGSSLK IERKPMRGTI CSMESSLTSS ESSGRKDEEP  240
PKNDNISTPK SNASVELSLM DSHPEKKPLI GGSSNQAKGK KRSGSNISDR TCVEQPLAKR  300
LELPEEETGH WLRKSGLLGS FDLNSQCQSD IELGPKAIDL NCRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	3e-87	G2-like family protein