PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021299638.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 317aa MW: 35613.9 Da PI: 7.3274 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+ +++++G g+W+t +++ g+ R++k+c++rw +yl XP_021299638.1 14 KGPWTPDEDQKLLAYIEEHGFGNWRTLPEKAGLQRCGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E++ ++++++ lG++ W++Ia++++ +Rt++++k++w+++ XP_021299638.1 67 RGKFSLQEEQTIIHLHAFLGNR-WSAIAAHLP-NRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MARSACCENM GLKKGPWTPD EDQKLLAYIE EHGFGNWRTL PEKAGLQRCG KSCRLRWINY 60 LRPDVKRGKF SLQEEQTIIH LHAFLGNRWS AIAAHLPNRT DNEIKNYWNT HIKKRFSKMG 120 IDPTTHKPIS NPPSSTSGGH SRNTGTLSHM AQWERARLEA EARLVRESKL VSKPSPNNKP 180 GFSARPRSTR TSSAPSTRSQ CLDVLKAWQS VVAGMFAITN NNLDPPPSTT FLDNSIPVST 240 TNELDLAAAG STCMEGIIAE DDQLMLDDRS NQVPELNEKF DTSMALHDST YHWTADSGNT 300 IEDFWDISVH DFGYPMD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 8e-87 | MYB family protein |