PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021299632.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 389aa MW: 42674 Da PI: 8.1551

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021299632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103	1.8e-32	223	278	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_021299632.1 223 KQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 278 79****************************************************97 PP
2	Myb_DNA-binding	42.8	1.2e-13	225	276	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ XP_021299632.1 225 RRCWSPELHRRFLHALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 276 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MINMDYAKKM RRCHEYVEAL EEERRKIQVF QRELPLCLEL VTQAIEACKK EISGGSTTTD 60 YMQGQSECSE QTSSDGPILE EFIPIKRSSD CSEEDDEQES HKSKDHDTNT KEKNVAAADK 120 KKSDWLRSVQ LWNNNQSPDP PLKEGAGKSG TAVEVKRNGG AFQPFHRGKT VEKSVQSVGK 180 ANASATSTST TESGSRGGGG GGEANNGNTN SKKEEKEGQS XEKQRRCWSP ELHRRFLHAL 240 QQLGGSHVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPTVHNNA NPQAPQFVVV 300 GGIWVPPPEY APMAATTASG ETASVTPTNG IYTPVAAPLP KLPQPSGAIV QRQPRLQSEE 360 RSSHSEGRVR SNSPSTSSST HTTTDSPLF

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MINMDYAKKM RRCHEYVEAL EEERRKIQVF QRELPLCLEL VTQAIEACKK EISGGSTTTD  60
YMQGQSECSE QTSSDGPILE EFIPIKRSSD CSEEDDEQES HKSKDHDTNT KEKNVAAADK  120
KKSDWLRSVQ LWNNNQSPDP PLKEGAGKSG TAVEVKRNGG AFQPFHRGKT VEKSVQSVGK  180
ANASATSTST TESGSRGGGG GGEANNGNTN SKKEEKEGQS XEKQRRCWSP ELHRRFLHAL  240
QQLGGSHVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPTVHNNA NPQAPQFVVV  300
GGIWVPPPEY APMAATTASG ETASVTPTNG IYTPVAAPLP KLPQPSGAIV QRQPRLQSEE  360
RSSHSEGRVR SNSPSTSSST HTTTDSPLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	1e-101	G2-like family protein