PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299535.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 334aa    MW: 38191 Da    PI: 7.6281
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.27.7e-54281571128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL+ k ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++
  XP_021299535.1  28 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKdKcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAI 121
                     69****************************.9***************943444443456************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  +++++g++ktLvfy+grap+g+ktdW+mheyrl
  XP_021299535.1 122 HLCNSKKIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 157
                     **********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MKILITHVFS FSNTVENKML PGNGQLSVPP GFRFHPTDEE LLYYYLRKKV SYEAIDLDVI  60
REVDLNKLEP WDLKDKCRIG SGPQNEWYFF SHKDKKYPTG TRTNRATTAG FWKATGRDKA  120
IHLCNSKKIG MRKTLVFYTG RAPHGQKTDW IMHEYRLDDD DSDVQEDGWV VCRVFKKKNH  180
NRGNFQPEFS QEESFTHIKT VASSAQLETR HNHLQALYDF SLDGSMHLPQ LFSPESAVAS  240
SFISPVSLNS TDIECSQNLL RLTSSGGCGL VQQERYNGEW SFLDKLLATH HLSMDQQHSQ  300
GKCSPSSQVD VGTSTQKFPF QYLGCEADIL KFSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-120NAC family protein