PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021299521.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 333aa MW: 37927.3 Da PI: 4.5956 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.4 | 2.2e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yL +k+ g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rdkky++g+r+nrat++gyWkatgkd++v+ XP_021299521.1 6 LPPGFRFHPTDEELVAYYLDRKIGGRTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDKKYPNGSRTNRATRAGYWKATGKDRAVY 99 79****************************.99**************96435566888************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+y+grap+g +t+Wvmheyrl XP_021299521.1 100 S-QKRAVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133 *.9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MAPMSLPPGF RFHPTDEELV AYYLDRKIGG RTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60 DMEWYFYSPR DKKYPNGSRT NRATRAGYWK ATGKDRAVYS QKRAVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLVESSPAT APASSLKDSY ALCRIFKKTI QIPNKTKEAV ESNVNAEKEV 180 GWVSDEQLFG DDASGTEISR GREAEDENFN TSSSDVTQGT PNETGMADDY HQAPFTSDEA 240 NSSANMCSLA ADFSSNLFQE MQMPGFKNLH YQVPYPPLEL EDFPQIDISE TKPEIIDEYT 300 IYDKYRDCMN GALEEIFSLC SSQDNSMPLS MQD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54330.1 | 1e-112 | NAC family protein |