PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021299509.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 351aa MW: 39043.4 Da PI: 8.3183

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021299509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_021299509.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.6	6e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_021299509.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MFQPKKPSTM NSHDRAMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DDLQRNAASS SGMMARSMNE 120 MQMEVQRRFH EQFEVQRHLQ LRIEAQGKYM QSILEKACQT LAGENMAAGG YKGMGNQGVP 180 DMGAMKDFGP LNFPPFQDLN IYGGDQLDLQ QNMDRPSLDA FMPNNDNICL GKKRPSPYSG 240 SGKSPLIWSD ELRLQDLGTA ASCLGPQDDP FKSEQIQIAP PSIDRSTDLD PISDIYEAKP 300 VLSGDGIGDK KYEASPKLER PSPRRAPLQA DRMNPMINSG SVAQGRNSPF G

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MFQPKKPSTM NSHDRAMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DDLQRNAASS SGMMARSMNE  120
MQMEVQRRFH EQFEVQRHLQ LRIEAQGKYM QSILEKACQT LAGENMAAGG YKGMGNQGVP  180
DMGAMKDFGP LNFPPFQDLN IYGGDQLDLQ QNMDRPSLDA FMPNNDNICL GKKRPSPYSG  240
SGKSPLIWSD ELRLQDLGTA ASCLGPQDDP FKSEQIQIAP PSIDRSTDLD PISDIYEAKP  300
VLSGDGIGDK KYEASPKLER PSPRRAPLQA DRMNPMINSG SVAQGRNSPF G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-127	G2-like family protein