PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021299508.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 360aa MW: 40041.5 Da PI: 8.3225

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021299508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_021299508.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.3e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_021299508.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MFQPKKPSTM NSHDRAMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DDLQRNAASS SGMMARSMND 120 NSHMVDATRM QMEVQRRFHE QFEVQRHLQL RIEAQGKYMQ SILEKACQTL AGENMAAGGY 180 KGMGNQGVPD MGAMKDFGPL NFPPFQDLNI YGGDQLDLQQ NMDRPSLDAF MPNNDNICLG 240 KKRPSPYSGS GKSPLIWSDE LRLQDLGTAA SCLGPQDDPF KSEQIQIAPP SIDRSTDLDP 300 ISDIYEAKPV LSGDGIGDKK YEASPKLERP SPRRAPLQAD RMNPMINSGS VAQGRNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MFQPKKPSTM NSHDRAMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DDLQRNAASS SGMMARSMND  120
NSHMVDATRM QMEVQRRFHE QFEVQRHLQL RIEAQGKYMQ SILEKACQTL AGENMAAGGY  180
KGMGNQGVPD MGAMKDFGPL NFPPFQDLNI YGGDQLDLQQ NMDRPSLDAF MPNNDNICLG  240
KKRPSPYSGS GKSPLIWSDE LRLQDLGTAA SCLGPQDDPF KSEQIQIAPP SIDRSTDLDP  300
ISDIYEAKPV LSGDGIGDKK YEASPKLERP SPRRAPLQAD RMNPMINSGS VAQGRNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-123	G2-like family protein