PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299462.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 282aa    MW: 31680.9 Da    PI: 5.5819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-09165208755
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ r RR++i ++ +eL +l+P  +      K++ ae+L  A +YIk+Lq
  XP_021299462.1 165 IAARERRRKITEKTQELGKLVPGgN------KMNTAEMLHAAFKYIKYLQ 208
                     56799*****************955......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MVLSSYSNWG TDLQSVHLEP IHHAKQPQAQ LVAGDHHLDY YWDTFELPCA FLDPYTDLNE  60
NFSYPESYNP LLPYLSSPYD PLSAFSPENE IIPYENFSSY PCPKRQKLIE GHSCSDFVPA  120
FFDGVGLYSC PVPEHQSSIH QINLDGNSAE SSKKINAKSV SVQSIAARER RRKITEKTQE  180
LGKLVPGGNK MNTAEMLHAA FKYIKYLQAQ VGILGFMDSF SEKEKATRKE SMQIVTSPKV  240
QEKLSMEEKC LVPKDVVLSL ATLSKPPLSD ELSQLLAFAP LE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.11e-28bHLH family protein