PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021299332.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 638aa MW: 72478 Da PI: 5.4648

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021299332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.4	3.6e-29	266	364	32	128
NAM 32 evikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvm 123 e ikev++yk+ P dL + + +++ +ewyfF++rd+kya+g+r++r++ +g+Wkatg+d++v+ kg+ vg kktLv+y g +W+m XP_021299332.1 266 EWIKEVELYKYSPDDLTQadnTSSKKVSEWYFFTPRDRKYANGSRPRRTAGDGFWKATGSDTPVMF-KGTIVGFKKTLVYYYGXXXXXXXXNWIM 359 45************843433344566**********************************.999********************* PP NAM 124 heyrl 128 he+ l XP_021299332.1 360 HEFVL 364 *87 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MEVVEEDYKN CNSTQPKFFS NNGNSVFTLD HAGTFYFISG ASRHCERGQR MVVKVMSPQE 60 SLPTSPAADS MLGGFLAGLY YNFSLFSPML LPIISSSLLP NFFRTWKMPC KHLANSYFYE 120 KAMCILAWKL FLPEEELSLD HPAANPLIPD KGPPRKLMPP TLTVAAEHDW MRDRAIASSE 180 ALCKVNADAP VLEYKDAVHE FATLDMLLKT PQAQARAEDI AIWVKKYISF RGPEFSYSLG 240 GFKCRKRLAA EHHPTATFPA IRFNREWIKE VELYKYSPDD LTQADNTSSK KVSEWYFFTP 300 RDRKYANGSR PRRTAGDGFW KATGSDTPVM FKGTIVGFKK TLVYYYGXXX XXXXXNWIMH 360 EFVLSNPPAR QRAGKDDMRL DDWVLCRLHN RNDTKAGATR QATDQKQEEE NYATTVAETE 420 ILEQQYENIL PLQIEIPAAH AEILEQQYGN ILPPQTEIPA APTEILKQEY GNILPPQTEQ 480 VQLQDFNLLL PQQTCSMPLY NPYDDSTSGF TSFPESLHPM WEYHSAIFPW QGVPVYGNII 540 TTVAPIATIP PPQFQHSQQQ QFSGAPNIHD PLNMQQFSGA PNIHDPLSMD QQQQQFSGAP 600 NIKAPLNMHQ QEQQFSDAPS ITELLAADQY LLDMDHDV

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MEVVEEDYKN CNSTQPKFFS NNGNSVFTLD HAGTFYFISG ASRHCERGQR MVVKVMSPQE  60
SLPTSPAADS MLGGFLAGLY YNFSLFSPML LPIISSSLLP NFFRTWKMPC KHLANSYFYE  120
KAMCILAWKL FLPEEELSLD HPAANPLIPD KGPPRKLMPP TLTVAAEHDW MRDRAIASSE  180
ALCKVNADAP VLEYKDAVHE FATLDMLLKT PQAQARAEDI AIWVKKYISF RGPEFSYSLG  240
GFKCRKRLAA EHHPTATFPA IRFNREWIKE VELYKYSPDD LTQADNTSSK KVSEWYFFTP  300
RDRKYANGSR PRRTAGDGFW KATGSDTPVM FKGTIVGFKK TLVYYYGXXX XXXXXNWIMH  360
EFVLSNPPAR QRAGKDDMRL DDWVLCRLHN RNDTKAGATR QATDQKQEEE NYATTVAETE  420
ILEQQYENIL PLQIEIPAAH AEILEQQYGN ILPPQTEIPA APTEILKQEY GNILPPQTEQ  480
VQLQDFNLLL PQQTCSMPLY NPYDDSTSGF TSFPESLHPM WEYHSAIFPW QGVPVYGNII  540
TTVAPIATIP PPQFQHSQQQ QFSGAPNIHD PLNMQQFSGA PNIHDPLSMD QQQQQFSGAP  600
NIKAPLNMHQ QEQQFSDAPS ITELLAADQY LLDMDHDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	3e-35	NAC family protein