PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021299322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 458aa MW: 51837.9 Da PI: 6.794 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.6 | 3.4e-19 | 211 | 257 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed llv++v+++G++ W++Ia++++ gR +kqc++rw+++l XP_021299322.1 211 KGQWTPQEDRLLVQLVTRHGTKKWSLIAKMLN-GRVGKQCRERWHNHL 257 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 55.7 | 1.1e-17 | 263 | 305 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eEd +l++a+k+ G++ W+ Iar+++ gRt++ +k++w+ XP_021299322.1 263 KDSWSEEEDRILIEAHKEIGNK-WAEIARRLP-GRTENTIKNHWN 305 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence |
MEFETSLRED FPFLSNLFSD NSPLKPDFGN GFPLDGSSSS KGLLHNFILP DHSHYSPSVN 60 NGPLLNPHHF HQFPAEGSSR NPFFGVSLTC TDAFEPYVNG FPNDLNAYIP SLAFAPDGVN 120 NNVFLQGFQS EGCWDFSQKV PPQPLQPETQ TTYQPLIFQD QEGPVAAKVA DEVSCVTGDQ 180 NGYQDKVDQK RDKRFQTRRC YKAPKKSNII KGQWTPQEDR LLVQLVTRHG TKKWSLIAKM 240 LNGRVGKQCR ERWHNHLRPD IRKDSWSEEE DRILIEAHKE IGNKWAEIAR RLPGRTENTI 300 KNHWNATKRR QYSRRKGKDS NPKGSLLQSY IKSVSSTSTR KDKGKRVMEA NAQMLINNNP 360 AATNPQAVQV QSSDINPKDW PVAVYNAQAD HDQPMNFSFD TSVFGESCTA SFESMLEEVP 420 SGSVVEESNA VMDFELPLEM DSKKKELDLL EMISQGNL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 189 | 206 | QKRDKRFQTRRCYKAPKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27785.1 | 1e-79 | MYB family protein |