PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021299244.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 211aa MW: 24057.2 Da PI: 8.4397 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.3 | 1.8e-18 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd++l d+vk G+g+W++Ia++ g++R++k+c++rw +yl XP_021299244.1 12 KGLWTVEEDKILMDYVKVNGKGQWNKIAKKTGLNRCGKSCRLRWINYL 59 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 57.9 | 2.4e-18 | 65 | 109 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g +++eE++l+++++k+lG++ W++Ia++++ gRt++q+k++w+ + XP_021299244.1 65 KGDFSEEEEDLIIRLHKLLGNR-WSLIAKRVP-GRTDNQVKNYWNGH 109 689*******************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MTMKKGESPY RKGLWTVEED KILMDYVKVN GKGQWNKIAK KTGLNRCGKS CRLRWINYLN 60 PDVKKGDFSE EEEDLIIRLH KLLGNRWSLI AKRVPGRTDN QVKNYWNGHL SKKMGIKEQN 120 RKRVHSRQSS KQVNEPDHAA IDPSPGDATS GTMEAAVDQS CQKATEVLNA TQESGISESY 180 VNPFWIPGDD LELSSLTMME YLDEYSSFDL A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 9e-78 | MYB family protein |