PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021299144.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 390aa MW: 44385.2 Da PI: 9.3271 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+t+++ g+ R++k+c++rw +yl XP_021299144.1 14 RGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 57.4 | 3.3e-18 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E++++++++++lG++ W++Ia++++ gRt++++k++w++ XP_021299144.1 67 RGAFTESEEDQIIQLHARLGNR-WSKIASHFP-GRTDNEIKNHWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MGRQPCCDKV GLKRGPWTIE EDHKLMNFIL NNGIHCWRTV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGAF TESEEDQIIQ LHARLGNRWS KIASHFPGRT DNEIKNHWNT RIKKKLKLLG 120 LDPVTHKPIE KAEKTDGKNT MTSNSNSSNK QEASFESKSE DDHAITVSTS RDETGEESQV 180 IFDETNDLLN NYQMLCGSFD LESWLNQDTN TSSSYTSSFS VEESNNPSMA WPRSKDSSSC 240 TRKCEHFEEN SVSLAQAMQR AIPRIHTIVA TPRLKCFSLN APRIVEVEYA NGSKFCLSAE 300 FLRVYSPAAD GKIRSIGGEK VISGRRHVGI MSAEPVGNYG VRIVFDDLHK TGIYSWDYFY 360 NLGTNKFTLI RNYIKTLKKH GLSRDPPKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 6e-85 | MYB family protein |