PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021298885.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 248aa MW: 27968.6 Da PI: 8.2214 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.9 | 7.5e-08 | 137 | 184 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P ++ k + a +L + Y++sLq XP_021298885.1 137 SHSLAERVRREKINEKLRCLQDLVPGCY----KAMGMALMLDVIISYVQSLQ 184 8************************982....33555556666666666655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MAEFTQELQS LKQFSFSSET NTNLQLINSR RALKNHDSSD NHAQLMALSN SILFHTQPPQ 60 ISFNFTGNLV RESKNDNTMP IAESPLDLST SPGSVTGSSG NNKSYVARKR KRNGEEDMQK 120 PKEVVHVRAK RGQATDSHSL AERVRREKIN EKLRCLQDLV PGCYKAMGMA LMLDVIISYV 180 QSLQNQIDFL SMKLSAASMY YDLNFSEIEV METLQGTKAN AYDQVQEMER MMREGHGGSS 240 YFNSARPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 5e-59 | bHLH family protein |