PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298777.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 302aa    MW: 34015.3 Da    PI: 4.6407
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM155.81.8e-4861341129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l+pGfrFhPtd el+++yLk+kv gkk+++ e+i+evdiyk+ PwdLp k  ++ ++ +wyfF++ +kky +g+r nrat+ gyWk+tgkd++v 
  XP_021298777.1   6 LAPGFRFHPTDVELLQYYLKRKVLGKKFSF-EAIAEVDIYKYAPWDLPdKsLLRIGDLKWYFFCPMEKKYGKGSRFNRATAYGYWKTTGKDRPVR 99 
                     579*************************99.89**************96445566889************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129
                       ++++vg  ktLvf++g+ap+ge+tdWv+heyrle
  XP_021298777.1 100 Y-NDKVVGSIKTLVFHRGKAPRGERTDWVLHEYRLE 134
                     9.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEKNSLAPGF RFHPTDVELL QYYLKRKVLG KKFSFEAIAE VDIYKYAPWD LPDKSLLRIG  60
DLKWYFFCPM EKKYGKGSRF NRATAYGYWK TTGKDRPVRY NDKVVGSIKT LVFHRGKAPR  120
GERTDWVLHE YRLEDEHLLD KGVVQDAYVL CVIFCKDGPG HRNGAQYGAP FREEDWTDDE  180
EVIKEVSNST DLPTPTFTGA ASPCFPQSQC LGSPAESSHF AASPSVVLDA DKSLTPMEAS  240
QVLVDDSISA MLSAGQSEDY SPVAIANDDL EFLESPDIAV DDEIMSLLAT FREDDTLNSL  300
MF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.33e-96NAC family protein