PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021298473.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 201aa MW: 22626.1 Da PI: 8.198 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.9 | 1.8e-08 | 80 | 123 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ r+RR++i ++++eL +l+P K+ ae+L+ A +Y++ Lq XP_021298473.1 80 IAARQRRRKITNKIQELGKLIPGgH------KMRTAEMLQAAYKYVNFLQ 123 667*******************945......****************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
CQQDPKRQKN VSNYYCSNFG ANFLAGCVPN SAPSPAATDL FLPKIPVPLP EFEPEMPTFS 60 CENENAKKTS PVSVSNLQSI AARQRRRKIT NKIQELGKLI PGGHKMRTAE MLQAAYKYVN 120 FLQAQVGVLE AMWSFHQGKE EALMHSQELP NLLISQAIQE KLYSEEKCLI PKDFVQTLAS 180 DYQIQSKPLI IEEINRILLT S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34820.1 | 3e-30 | bHLH family protein |