PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298449.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 327aa    MW: 35300.1 Da    PI: 9.8186
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-20184233255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  XP_021298449.1 184 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 233
                     69*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MNFSFCQSLF SPTMQSSAIV NYHPLQTVSV FCRPETSETI ETPCLYKPLG ASSSHFSSCS  60
STIAPTHFYR QNYLPIYADI SGVFSSLNAL DKIHETELET IMETRPETPP VLDGIAAVVG  120
QHVLFGNKAN PTAPTTTTEL SNSIILSDAN SSKLEAPGFV SASQRFGSNK RNVSPAVAVS  180
VQKSYRGVRK RPWGRWSAEI RDRIGRCRHW LGTFDTAEEA ARAYDAAARR LRGSKAKTNF  240
EIPSVLPLAS PSTSSSSSEA KKKVKCKVKT ERKCAVVTSV AHLFSPSSFG GSEGKGNVEL  300
ELKLGVGLNS KGAASNTSLV KKSIPLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.15e-23ERF family protein