PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298322.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 317aa    MW: 34930.6 Da    PI: 8.499
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer94.11.2e-2965121259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     + vrY+eC kNhAa++Gg+a+DGCgEfmp  geeg+++al+C+A +CHRnFHR+e e 
  XP_021298322.1  65 KVVRYRECXKNHAAAMGGNATDGCGEFMPX-GEEGSIEALTCSAXNCHRNFHRKEIEG 121
                     679**************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MELSSQDGEI PIPLNSTYGG GHMIHHDHHA APTQPYHTSS APQITCTGPS IATNLDDDHH  60
XGFKKVVRYR ECXKNHAAAM GGNATDGCGE FMPXGEEGSI EALTCSAXNC HRNFHRKEIE  120
GEPSPSSCDC YPSHSPHLSR AGRKLFLGTH KXILPPEPLG LGYPTATGTL IHSKAAPNPT  180
PHQMIMSYNM GSLPSESDDQ ADGGGVVTRP HQLVKKRFRT KFTQEQKEKM LNFADKVGWK  240
IQKQEEAVVQ QFCQSGVKRR VLKVWMHNNK LNLARKTLLP TTTPTTTLLH DKPKLISVSS  300
PLLSLSLPLL LCVFQFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.12e-74ZF-HD family protein