PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298313.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 178aa    MW: 20031.5 Da    PI: 6.7787
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298313.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-19755254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                    +y+GVr+++ +g+Wv+eIr+p+    ++r++lg+f tae+Aa+a+++a++ + 
  XP_021298313.1  7 RYRGVRQRH-WGSWVSEIRHPVL---KTRIWLGTFETAEDAARAYDEAARLMC 55
                    69******9.**********744...5**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MGRPQQRYRG VRQRHWGSWV SEIRHPVLKT RIWLGTFETA EDAARAYDEA ARLMCGQKAR  60
TNFPYNPNEP QSSSSKLLSA TLAAKLHKCH MAALQLAKKN AAKESYAAQC HPLAPTSGIA  120
QSIGEMDCRR QPENKWDGEE SQVGSEQQFI PLEDDHIDQM IEELLDYGSI ELCSVTST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-50ERF family protein