PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021297914.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 655aa MW: 74276.1 Da PI: 5.8324

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021297914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	183.2	6.1e-57	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelvv+yLk+k++g+k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratksgyWkatgkd++v XP_021297914.1 6 LPPGFRFHPTDEELVVYYLKRKINGRKIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVN 99 79**************************.99***********6434555777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g++tdWvmheyrl XP_021297914.1 100 S-QMRAVGMKKTLVYYRGRAPHGTRTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MAPVSLPPGF RFHPTDEELV VYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKSGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH 120 GTRTDWVMHE YRLDERECET PSGLQDAYAL CRVFKKSATG PKIGEHYLAT TANQITSEHS 180 SSIELYSEGR CDESSDFAIP LDTCSPSILD RSPIDICESR DVKWMQSLSE DAFGLSNPPS 240 FSSYGTLPYP PSKVDVALEC ARLQHRLSLP TLEVQDFPQV GLTHYKAMRT TPMCESQHET 300 DILRQILSVA HASQELINPT GHQDAWGGSS SNTNDFTFMT ADDYMSRFSL EESSTRSIDI 360 SEAQLGDLKA ERMVENLRWV GMSSKDMEQY CFMEETKIVP IENISSFTRN ECNGIQGESG 420 HNHNCDGFID TKINDPEIED FAQGFMDDDP HEHFLDEGNI DDLTSSPSFE VVEDIKINHG 480 MFVSTRQVAE TFFHQIVPSQ TVKVHQNPVI ATSFVMGKAE SHETRYNKGN SFFRKFNACA 540 SGKFMEIITF TEPCKKTASA FLWIVVLLLM HSFYLEEDIT NEKLMDGLSA KETKEKALTV 600 MSITGKPRTK GNKKKEIYSL VKASTWNDFG LLLKKLGFFL TISLVLCTLL ASTLY

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MAPVSLPPGF RFHPTDEELV VYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKSGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH  120
GTRTDWVMHE YRLDERECET PSGLQDAYAL CRVFKKSATG PKIGEHYLAT TANQITSEHS  180
SSIELYSEGR CDESSDFAIP LDTCSPSILD RSPIDICESR DVKWMQSLSE DAFGLSNPPS  240
FSSYGTLPYP PSKVDVALEC ARLQHRLSLP TLEVQDFPQV GLTHYKAMRT TPMCESQHET  300
DILRQILSVA HASQELINPT GHQDAWGGSS SNTNDFTFMT ADDYMSRFSL EESSTRSIDI  360
SEAQLGDLKA ERMVENLRWV GMSSKDMEQY CFMEETKIVP IENISSFTRN ECNGIQGESG  420
HNHNCDGFID TKINDPEIED FAQGFMDDDP HEHFLDEGNI DDLTSSPSFE VVEDIKINHG  480
MFVSTRQVAE TFFHQIVPSQ TVKVHQNPVI ATSFVMGKAE SHETRYNKGN SFFRKFNACA  540
SGKFMEIITF TEPCKKTASA FLWIVVLLLM HSFYLEEDIT NEKLMDGLSA KETKEKALTV  600
MSITGKPRTK GNKKKEIYSL VKASTWNDFG LLLKKLGFFL TISLVLCTLL ASTLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-171	NAC family protein