PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297898.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 266aa    MW: 29044.1 Da    PI: 7.781
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297898.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.8e-2053102255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a++aa++k++g
  XP_021297898.1  53 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAAAYDAAALKFKG 102
                     7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MAAASAFAHH HRLNTQSDIL PHQQATDQVS VLTEQDQSSL PAKDQGNVIR KRHYRGVRQR  60
PWGKWAAEIR DPKKAARVWL GTFDTAEAAA AAYDAAALKF KGSKAKLNFP ERVQGGGLDQ  120
FCFSACSNNN PIPVPNEQVP SSGSSSTPQL PPPPPNIAPS SLPHEAFPYL SQYVQLLSSD  180
FTDNYWQYVE SAGLHTQQPA LFSHTSSSMT SSTTYSGMAR NQVGEHDELP RFSSPAQMGS  240
FSSSSPSSHL FLNPGNDYSE GRKPKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-32ERF family protein