PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297762.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 291aa    MW: 30839.3 Da    PI: 5.8737
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.51e-15121169255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa a++ a+ +l+g
  XP_021297762.1 121 TYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYATPEMAATAYDVAAIALKG 169
                     69***6..678*********843...5***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MFGFVKGSAN SPRLSPLTNM ANPSTNVPPK DQPPSTPTVQ IPDPPASLVQ PQDQSPKPSS  60
ASPPDNPLAR LVHSPGRTTL GQPQDQSPKS PKPSTVPTPR PVQSPGRSSS SALPSSGRHP  120
TYRGIRSRSG KWVSEIREPR KTTRIWLGTY ATPEMAATAY DVAAIALKGP DTDLNFPDMI  180
LSYPKVASTS ASDIRAAAAS AAASRLPKPD TGLSKDSKQD QGEPENKGTT SGSCMESGSG  240
QEFIDDEALL NFPNLLVNMA EGMLISPPRI NSPPSDDSPE DSDVESLWTY T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-36ERF family protein