PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021297759.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 342aa MW: 38904.2 Da PI: 7.7563

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021297759.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.2	1.3e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++ +++ +i evd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_021297759.1 16 LPPGFRFHPTDEELITHYLSHKVLNSCFRA-IAIGEVDLNKCEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFK- 108 79***********************999.88***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg+kktLvfy+grapkgekt+Wvmheyrle XP_021297759.1 109 AKTLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MENISSFRKE DEQMELPPGF RFHPTDEELI THYLSHKVLN SCFRAIAIGE VDLNKCEPWD 60 LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIFKAK TLVGMKKTLV 120 FYRGRAPKGE KTNWVMHEYR LEGKYSIYNL PKTAKNEWVI CRVFQKSPGG KKIHISGFSR 180 LGSYGNDLPP AVLPPLMDCS PHNSETRTGA GETSHVTCFS DPMEDQKTPE EMIDSFNTSL 240 LASSSSSDMS PTSILLSKTF LPSSAYTNQI IPNIWNLQYS DSFWMQDHSI LKMLLESPRV 300 NSKQNSKAEF SQDSVVSNPE MIQDPSCSAG PADVGCLWSY KI

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MENISSFRKE DEQMELPPGF RFHPTDEELI THYLSHKVLN SCFRAIAIGE VDLNKCEPWD  60
LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIFKAK TLVGMKKTLV  120
FYRGRAPKGE KTNWVMHEYR LEGKYSIYNL PKTAKNEWVI CRVFQKSPGG KKIHISGFSR  180
LGSYGNDLPP AVLPPLMDCS PHNSETRTGA GETSHVTCFS DPMEDQKTPE EMIDSFNTSL  240
LASSSSSDMS PTSILLSKTF LPSSAYTNQI IPNIWNLQYS DSFWMQDHSI LKMLLESPRV  300
NSKQNSKAEF SQDSVVSNPE MIQDPSCSAG PADVGCLWSY KI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-130	NAC family protein