PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297751.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 412aa    MW: 45254.2 Da    PI: 4.4321
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-194695255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_021297751.1 46 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 95
                    789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MARKRKAGPV VEQKDVTSEQ TMAWDEMVKE AAAAAALGGP RRARKRFVGV RQRPSGRWVA  60
EIKDTIQKIR VWLGTFDTAE EAARAYDEAA CLLRGANTRT NFWPCSPSSN STPALSSKIT  120
NLLLQRLKAR KNPSAPLPSS PPINQQPMQQ AEKYREDTTD FLDSQFPDFL NDPEDCYMSN  180
DNINNTTANA AGYLTTSLES CLTENEDSSR RVLYSGCTFS DAAQSSRFAG DDVGEERDED  240
GEEGHDMGAL DFQFVDDIGA SCYYSPFQIA EEIEVPMEPE SLGDEPSIIS AAMKRMTYER  300
KFSASLYAFN GISELLRLKL GSENVMGRAT SEQLTKLENA CKKNKGERTL KEDDTEMMGT  360
EQAKSPQTSV ESAGSNMAFS SPSSVEMGAS SAGNDGESLW SSLDLPPICF VN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-22ERF family protein