PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021297726.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 414aa MW: 46677.1 Da PI: 8.4524

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021297726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.5	4.6e-52	29	156	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL++k+++++l++ e i++vdiyk+ePwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_021297726.1 29 MLPGFRFHPTDEELVGFYLRRKIQQRPLPI-ELIRQVDIYKYEPWDLPKLAASGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 122 579*************************.89***********8888899***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ glkk+Lvfy+gra kg ktdW+mhe+rl XP_021297726.1 123 dSTKCLGLKKSLVFYRGRAAKGIKTDWMMHEFRL 156 555669************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MLLKILKKLR RSKSNMDEKI DVDKVEDVML PGFRFHPTDE ELVGFYLRRK IQQRPLPIEL 60 IRQVDIYKYE PWDLPKLAAS GEKEWYFYCP RDRKYRNSAR PNRVTGAGFW KATGTDRPIY 120 SSDSTKCLGL KKSLVFYRGR AAKGIKTDWM MHEFRLPSLS DSTPPKRLLD KSLPANDAWA 180 ICRIFKKTNS MAQRALSHPW ISSLPEITAS EILHQGAPCP QFSSEDISCA TEIESAIQLC 240 SNSVLQQGST ASFSAVDIHS YKPFNTTVYR PSLFSVSNGD LHNNFMFSQL DMSGTPKCTV 300 DAAPMLLSPP LISDVTKASE SIDFGGQQQQ YSGFSISMPQ DMQVNAGVGK SEEGMRRNSN 360 GTPDDNHWGT IRSMGFPFSL APNVPDTWKP NLPWDSPQCP SEMSTTYSTD KCYT

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MLLKILKKLR RSKSNMDEKI DVDKVEDVML PGFRFHPTDE ELVGFYLRRK IQQRPLPIEL  60
IRQVDIYKYE PWDLPKLAAS GEKEWYFYCP RDRKYRNSAR PNRVTGAGFW KATGTDRPIY  120
SSDSTKCLGL KKSLVFYRGR AAKGIKTDWM MHEFRLPSLS DSTPPKRLLD KSLPANDAWA  180
ICRIFKKTNS MAQRALSHPW ISSLPEITAS EILHQGAPCP QFSSEDISCA TEIESAIQLC  240
SNSVLQQGST ASFSAVDIHS YKPFNTTVYR PSLFSVSNGD LHNNFMFSQL DMSGTPKCTV  300
DAAPMLLSPP LISDVTKASE SIDFGGQQQQ YSGFSISMPQ DMQVNAGVGK SEEGMRRNSN  360
GTPDDNHWGT IRSMGFPFSL APNVPDTWKP NLPWDSPQCP SEMSTTYSTD KCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	2e-99	NAC family protein