PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021297648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 798aa MW: 88780.9 Da PI: 5.2972 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.2 | 1.9e-20 | 84 | 139 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t+ q++e+e++F+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k XP_021297648.1 84 KKRYHRHTARQIQEMEAVFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMK 139 688899***********************************************998 PP | |||||||
2 | START | 154 | 1.3e-48 | 281 | 508 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS...............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....E CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv..............dsgealrasgvvdmvlallveellddkeqWdetla....k 78 la + ++elvk+ +ep+W + eng e l +e ++ +++ea+r+s+vv+m++++lv +ld + +W+e ++ + XP_021297648.1 281 LAMSSMDELVKMCRTNEPLWIRNN--ENGRELLNLEEHARMfpwapsnlkqrsteFRTEASRDSAVVIMNSVTLVDAFLDAN-KWTELFPsivaR 372 677899****************99..999999999988887999999***********************************.************ PP EEEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE....TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEE CS START 79 aetlevissg.....galqlmvaelqalsplvp.RdfvfvRyirq...lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskv 164 a+t++v+s g g lqlm+aelq+lsplvp R+ +f+Ry++q + + w+ivd +d ++ ++s+ +++pSg+li++++ng+s+v XP_021297648.1 373 AKTVQVVSAGvsgtnGSLQLMYAELQVLSPLVPtREAYFLRYCQQqnlDDETYWAIVDFPIDGFHNNL-QASFPLYRRRPSGCLIQDMPNGYSRV 466 *********************************************99888889*********999998.67666666****************** PP EEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 165 twvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 twveh++ +++ +h+++ ++v +g+a+ga +w+a l+rqce+ XP_021297648.1 467 TWVEHAEIEEKPVHQIFSHFVYNGMAFGAHRWLAVLERQCER 508 ****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 798 aa Download sequence |
MYGDCQVISS MGGNVVSSET LFSSPIQNPN FNFLPFQPLP PMIPKEENGL LMRGKEEMDS 60 GSGSEQVEEK SGNEQESTEQ PPKKKRYHRH TARQIQEMEA VFKECPHPDD KQRMKLSQEL 120 GLKPRQVKFW FQNRRTQMKA QQDRSDNVIL RAENESLKNE FYRLQAELSK LVCPNCGGPA 180 VPGGISFEEL RIENARLREE LERVCAIASR YIGRPIQTMG AAPALMPPSL DLDMNIYPRH 240 FTEPMASCTE MMPVPMLPET ASFQENNLVL AEEEKTVAME LAMSSMDELV KMCRTNEPLW 300 IRNNENGREL LNLEEHARMF PWAPSNLKQR STEFRTEASR DSAVVIMNSV TLVDAFLDAN 360 KWTELFPSIV ARAKTVQVVS AGVSGTNGSL QLMYAELQVL SPLVPTREAY FLRYCQQQNL 420 DDETYWAIVD FPIDGFHNNL QASFPLYRRR PSGCLIQDMP NGYSRVTWVE HAEIEEKPVH 480 QIFSHFVYNG MAFGAHRWLA VLERQCERVA SLMARNITDL GVIPSPEARK NLMRLAQRLI 540 RTFCVNISTS SGQLWTALPD SADDTVRITT RKVTEPGQPN GLILCAVSTT WLPYPHDQVF 600 DLLRDERRRS QLEVLSNGNA LHEVAHIANG AHPGNCISLL RINVASNSSQ HVELMLQESC 660 TDRSGSLVVY STVDVDSVQL AMSGEDPSCI PLLPLGFFIT PVELIRDAGD DQGKSVPPSE 720 EASGHISGSL LTVGLQVLAS TVPSAKINLS SIAAINNHLC TTVHQITAAL SSSTAPSCPD 780 NGIGVLGSCT EPASAPEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46880.1 | 0.0 | HD-ZIP family protein |